January 2012 Archives by author

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Starting: Tue Jan 3 14:18:14 GMT 2012
Ending: Tue Jan 31 20:15:37 GMT 2012
Messages: 147

• [ensembl-dev] Plant API download?   simon andrews (BI)
• [ensembl-dev] Plant API download?   simon andrews (BI)
• [ensembl-dev] Running API scripts against old releases   simon andrews (BI)
• [ensembl-dev] Possible VEP bug?   Mark Aquino
• [ensembl-dev] Missing UniProt ACs for fruitfly?   Gary Bader
• [ensembl-dev] Missing UniProt ACs for fruitfly?   Gary Bader
• [ensembl-dev] Chimp alignment for Chromosome Y   Kathryn Beal
• [ensembl-dev] Chimp alignment for Chromosome Y   Kathryn Beal
• [ensembl-dev] Chimp alignment for Chromosome Y   Kathryn Beal
• [ensembl-dev] canonical transcript stable IDs in Ensembl release 65 gene mart   Becq, Jennifer
• [ensembl-dev] Plant API download?   Dan Bolser
• [ensembl-dev] POD to Doxygen errors   Dan Bolser
• [ensembl-dev] CpG Island   Yuan Chen
• [ensembl-dev] CpG Island   Yuan Chen
• [ensembl-dev] CpG Island   Yuan Chen
• [ensembl-dev] Chimp alignment for Chromosome Y   Yuan Chen
• [ensembl-dev] Chimp alignment for Chromosome Y   Yuan Chen
• [ensembl-dev] "random" chromosomes form UCSC   Hiram Clawson
• [ensembl-dev] "random" chromosomes form UCSC   Hiram Clawson
• [ensembl-dev] Ensembl Genomes release 12 biomaRt availability   Cook, Malcolm
• [ensembl-dev] CpG Island   Susan Fairley
• [ensembl-dev] CpG Island   Susan Fairley
• [ensembl-dev] Is Perl API already version 66?   Paul Flicek
• [ensembl-dev] [Ensemblgenomes] meta_key 'schema_version' in meta table warning   Giuseppe G
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Giuseppe G
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Giuseppe G
• [ensembl-dev] Release 65 - "cigar_line" exception when calling get_SimpleAlign on homology object   Giuseppe G.
• [ensembl-dev] Release 65 - "cigar_line" exception when calling get_SimpleAlign on homology object   Giuseppe G.
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Giuseppe G.
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Giuseppe G.
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Giuseppe G.
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Giuseppe G.
• [ensembl-dev] [Compara] Memory leak?   Giuseppe G.
• [ensembl-dev] [Compara] Memory leak?   Giuseppe G.
• [ensembl-dev] OMIM   Giulietta
• [ensembl-dev] versioned Ensembl identifiers in HGVS tags reported by VEP   Reece Hart
• [ensembl-dev] versioned Ensembl identifiers in HGVS tags reported by VEP   Reece Hart
• [ensembl-dev] slice_adapter as MySQL procedure?   Reece Hart
• [ensembl-dev] local compara   Javier Herrero
• [ensembl-dev] question about chain-net results in table 'genomic_align'   Javier Herrero
• [ensembl-dev] Release 65 - "cigar_line" exception when calling get_SimpleAlign on homology object   Javier Herrero
• [ensembl-dev] [Compara] Memory leak?   Javier Herrero
• [ensembl-dev] [Compara] Memory leak?   Javier Herrero
• [ensembl-dev] [Compara] Memory leak?   Javier Herrero
• [ensembl-dev] Running API scripts against old releases   Javier Herrero
• [ensembl-dev] "random" chromosomes form UCSC   Javier Herrero
• [ensembl-dev] "random" chromosomes form UCSC   Javier Herrero
• [ensembl-dev] FW: Download human body map 2.0 transcript coordinates   Thibaut Hourlier
• [ensembl-dev] Translating ranges quickly using multiple species alignment files ( *.emf )?   Robert Hubley
• [ensembl-dev] local compara   Gauthier Jean-Pierre
• [ensembl-dev] adding genomes   Gauthier Jean-Pierre
• [ensembl-dev] Newbie question: BlastView config for Ubuntu "Lucid" woes   Andy Jenkinson
• [ensembl-dev] e62 mart builder files   Rhoda Kinsella
• [ensembl-dev] EnsemblBacteria data error ?   Eugene Kulesha
• [ensembl-dev] EnsemblBacteria data error ?   Eugene Kulesha
• [ensembl-dev] Newbie question: BlastView config for Ubuntu "Lucid" woes   Nick Langridge
• [ensembl-dev] Newbie question: BlastView config for Ubuntu "Lucid" woes   Nick Langridge
• [ensembl-dev] FW: Download human body map 2.0 transcript coordinates   Li, Ying L
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Uma Maheswari
• [ensembl-dev] Is Perl API already version 66?   Sergei Manakov
• [ensembl-dev] Is Perl API already version 66?   Sergei Manakov
• [ensembl-dev] Is Perl API already version 66?   Sergei Manakov
• [ensembl-dev] "random" chromosomes form UCSC   Sergei Manakov
• [ensembl-dev] "random" chromosomes form UCSC   Sergei Manakov
• [ensembl-dev] Enumerating repeat types for get_all_RepeatFeatures()   John Marshall
• [ensembl-dev] Enumerating repeat types for get_all_RepeatFeatures()   John Marshall
• [ensembl-dev] Missing UniProt ACs for fruitfly?   Thomas Maurel
• [ensembl-dev] versioned Ensembl identifiers in HGVS tags reported by VEP   Will McLaren
• [ensembl-dev] VEP feature requests   Will McLaren
• [ensembl-dev] Variant Effect Predictor   Will McLaren
• [ensembl-dev] VEP script runtime errors   Will McLaren
• [ensembl-dev] vep 2.3 issues   Will McLaren
• [ensembl-dev] vep 2.3 issues   Will McLaren
• [ensembl-dev] vep 2.3 issues   Will McLaren
• [ensembl-dev] VEP script runtime errors   Will McLaren
• [ensembl-dev] vep 2.3 issues   Will McLaren
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Sébastien Moretti
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Sébastien Moretti
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Sébastien Moretti
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Matthieu Muffato
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Matthieu Muffato
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Matthieu Muffato
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Matthieu Muffato
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Matthieu Muffato
• [ensembl-dev] species tree for EnsemblGenomes compara databases   Matthieu Muffato
• [ensembl-dev] e62 mart builder files   Kiran Mukhyala
• [ensembl-dev] Get ftp url + path from a species name   Celine Noirot
• [ensembl-dev] OMIM   Bert Overduin
• [ensembl-dev] Is Perl API already version 66?   Bert Overduin
• [ensembl-dev] CpG Island   Bert Overduin
• [ensembl-dev] VEP script runtime errors   Hardip Patel
• [ensembl-dev] VEP script runtime errors   Hardip Patel
• [ensembl-dev] vep 2.3 issues   Hardip Patel
• [ensembl-dev] vep 2.3 issues   Hardip Patel
• [ensembl-dev] vep 2.3 issues   Hardip Patel
• [ensembl-dev] vep 2.3 issues   Hardip Patel
• [ensembl-dev] vep 2.3 issues   Hardip Patel
• [ensembl-dev] Variant Effect Predictor   Aparna Radhakrishnan
• [ensembl-dev] Adding additional aliases to local MySQL mirror   Keiran Raine
• [ensembl-dev] OMIM   Majid Rastegar-Mojarad
• [ensembl-dev] RegulatoryFeature (and MotifFeature?) not fully qualifying correctly in BaseVepPlugin   Graham Ritchie
• [ensembl-dev] RegulatoryFeature (and MotifFeature?) not fully qualifying correctly in BaseVepPlugin   Graham Ritchie
• [ensembl-dev] VEP feature requests   Graham Ritchie
• [ensembl-dev] VEP plugin execution order   Graham Ritchie
• [ensembl-dev] Difficulty with finding genes by HUGO name in ensembl database   Michael Schuster
• [ensembl-dev] Ensembl Genomes release 12 biomaRt availability   Dan Staines
• [ensembl-dev] Plant API download?   Dan Staines
• [ensembl-dev] Plant API download?   Dan Staines
• [ensembl-dev] entrez gene IDs missing on protist biomarts?   Dan Staines
• [ensembl-dev] local compara   Dan Staines
• [ensembl-dev] EnsemblBacteria data error ?   Dan Staines
• [ensembl-dev] EnsemblBacteria data error ?   Dan Staines
• [ensembl-dev] [Ensemblgenomes] meta_key 'schema_version' in meta table warning   Dan Staines
• [ensembl-dev] Newbie question: BlastView config for Ubuntu "Lucid" woes   Martin Steele
• [ensembl-dev] Newbie: Possible to use Condor instead of LSF with Blast?   Martin Steele
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Moretti Sébastien
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Moretti Sébastien
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Moretti Sébastien
• [ensembl-dev] $protein_tree_adaptor->fetch_all_roots   Moretti Sébastien
• [ensembl-dev] versioned Ensembl identifiers in HGVS tags reported by VEP   Kieron Taylor
• [ensembl-dev] Biotypes in GTF release 65   Arno Velds
• [ensembl-dev] Could not retrieve the sequence of a gene   Andy Yates
• [ensembl-dev] Enumerating repeat types for get_all_RepeatFeatures()   Andy Yates
• [ensembl-dev] Get ftp url + path from a species name   Andy Yates
• [ensembl-dev] slice_adapter as MySQL procedure?   Andy Yates
• [ensembl-dev] Missing UniProt ACs for fruitfly?   Andy Yates
• [ensembl-dev] POD to Doxygen errors   Andy Yates
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Andy Yates
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Andy Yates
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Andy Yates
• [ensembl-dev] Adding additional aliases to local MySQL mirror   Andy Yates
• [ensembl-dev] Biotypes in GTF release 65   Andy Yates
• [ensembl-dev] Release 65 - 'not a valid species name' exception thrown by get_adaptor()   Andy Yates
• [ensembl-dev] RegulatoryFeature (and MotifFeature?) not fully qualifying correctly in BaseVepPlugin   Michael Yourshaw
• [ensembl-dev] VEP feature requests   Michael Yourshaw
• [ensembl-dev] VEP feature requests   Michael Yourshaw
• [ensembl-dev] VEP plugin execution order   Michael Yourshaw
• [ensembl-dev] canonical transcript stable IDs in Ensembl release 65 gene mart   rhoda at ebi.ac.uk
• [ensembl-dev] species tree for EnsemblGenomes compara databases   alexandra louis
• [ensembl-dev] Could not retrieve the sequence of a gene   jtang at mappi.helsinki.fi
• [ensembl-dev] entrez gene IDs missing on protist biomarts?   seth redmond
• [ensembl-dev] entrez gene IDs missing on protist biomarts?   seth redmond
• [ensembl-dev] Invitation to connect on LinkedIn   telius yikwa
• [ensembl-dev] Chimp alignment for Chromosome Y   yuan
• [ensembl-dev] EnsemblBacteria table type problem   陈岗
• [ensembl-dev] EnsemblBacteria table type problem   陈岗
• [ensembl-dev] EnsemblBacteria data error ?   陈岗

Last message date: Tue Jan 31 20:15:37 GMT 2012
Archived on: Tue Nov 2 21:56:15 GMT 2021

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