[ensembl-dev] Plant API download?

Dan Staines dstaines at ebi.ac.uk
Fri Jan 6 11:31:37 GMT 2012


Looks like the branch is missing. I'll try and get this sorted for you...

On 01/06/2012 11:25 AM, simon andrews (BI) wrote:
> I’ve been trying to download the core plant API bundle using the link on
> the website at:
> _http://plants.ensembl.org/info/docs/api/api_installation.html_
> Which points to:
> _http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/ensembl.tar.gz?root=ensembl&only_with_tag=branch-ensemblgenomes-12-65&view=tar_
> <http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/ensembl.tar.gz?root=ensembl&only_with_tag=branch-ensemblgenomes-12-65&view=tar>
> ..but I’m only getting a tiny file returned (29 bytes).
> I tried pulling the files directly out of CVS using:
> cvs -d :pserver:cvsuser at cvs.sanger.ac.uk:/cvsroot/ensembl checkout -r
> branch-ensemblgenomes-12-65 ensembl
> but although I get a load of messages saying:
> cvs checkout: Updating ensembl
> cvs checkout: Updating ensembl/Apache
> cvs checkout: Updating ensembl/Apache/EnsEMBL
> cvs checkout: Updating ensembl/cgi-bin
> cvs checkout: Updating ensembl/corba
> cvs checkout: Updating ensembl/corba/artemis
> cvs checkout: Updating ensembl/corba/popt
> cvs checkout: Updating ensembl/corba/popt/po
> cvs checkout: Updating ensembl/corba/seq
> cvs checkout: Updating ensembl/corba/simpleobjectman
> cvs checkout: Updating ensembl/docs
> I don’t actually get anything written to my local directory. I also see
> a warning saying:
> cvs checkout: warning: cannot open history file
> `/cvsroot/ensembl/CVSROOT/history' for write: Permission denied
> ..which may or may not be relevant.
> Any clues?
> Cheers
> Simon.
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-- 
Dan Staines, PhD               Ensembl Genomes Technical Coordinator
EMBL-EBI                       Tel: +44-(0)1223-492507
Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/




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