[ensembl-dev] missing some used_ref fields in VEP json output
dlemos at ebi.ac.uk
Fri Jan 21 10:50:56 GMT 2022
We have added a fix to JSON output which will be available in the next
On 26/10/2021 15:12, Diana Lemos wrote:
> Hi Michael,
> Thank you for reporting this issue.
> The JSON output does not include used_ref and given_ref if the ref is
> "-" which is the case for your example. We are working on a fix.
> Best wishes,
> On 22/10/2021 22:30, Michael Yourshaw wrote:
>> When I updated to the latest VEP I encountered a handful of
>> transcripts in the json output that did not contain a used_ref field.
>> This seems to be a problem introduced recently and does not affect
>> the great majority of variants.
>> An example record:
>> is attached.
>> Michael Yourshaw
>> myourshaw at gmail.com <mailto:myourshaw at ucla.edu>
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