[ensembl-dev] can you put me off the list?
Andy Yates
ayates at ebi.ac.uk
Tue May 21 13:43:25 BST 2019
Dear all,
Apologies for the issues here. I can see that Gwang-Jin has now been able to unsubscribe thanks your help Wallace Ko. We have checked our email footers and have identified the issue and hopefully fixed this. I'll monitor the situation.
Thank you for helping other list subscribers out with these issues.
Andy
------------
Andrew Yates - Genomics Technology Infrastructure Team Leader
The European Bioinformatics Institute (EMBL-EBI)
Wellcome Genome Campus
Hinxton, Cambridge
CB10 1SD, United Kingdom
Tel: +44-(0)1223-492538
Fax: +44-(0)1223-494468
Skype: andy.yates.ebi
http://www.ebi.ac.uk/
http://www.ensembl.org/
> On 21 May 2019, at 11:39, Wallace Ko <myko at l3-bioinfo.com> wrote:
>
> Hi Matteo and Gwang-Jin,
>
> The link in the email footer is indeed dead for me too. You can visit https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org to unsubscribe from the list. If you still have problem, please contact mailman at mail.ensembl.org instead.
>
> Regards,
> Wallace Ko
>
>
> On Tue, May 21, 2019 at 6:32 PM Matteo Pallocca <matteo.pallocca at gmail.com> wrote:
>
> Dear all,
>
> I confirm the issue of the unsubscribe function :)
>
> all the best
> MP
>
> Il giorno mar 21 mag 2019 alle ore 11:20 Gwang-Jin Kim <gwang-jin.kim at pharmakol.uni-freiburg.de> ha scritto:
> Hello,
>
> can you put me off the Ensembl developers list? I subscribed
> accidentally.
> The unsubscribe link is dead for me (please repair). And marking as
> spam didn't help.
>
> Best,
> Gwang-Jin
>
> On Tue, 21 May 2019 08:30:22 +0100
> Nick Langridge <nickl at ebi.ac.uk> wrote:
> >Hi Kurt,
> >
> >Indeed it has now been fixed - it was done late yesterday and I didn't
> >get a chance to announce it. Sorry for any inconvnience caused.
> >
> >The issue arose out teething problems with a new release process and
> >we hope to avoid a recurrance in the future.
> >
> >Thanks for your patience.
> >
> >Best regards,
> >Nick
> >
> >On 20/05/2019 19:06, Kurt Wheeler wrote:
> >> If anyone else was affected by this bug it looks like it's been
> >fixed now.
> >>
> >> On Wed, May 15, 2019 at 10:40 AM Kurt Wheeler
> ><kurt.wheeler91 at gmail.com <mailto:kurt.wheeler91 at gmail.com>> wrote:
> >>
> >> Hi Kieron,
> >>
> >> Is there any way we can be alerted when this issue is corrected?
> >> Maybe an issue or bug report we can subscribe to?
> >>
> >> We have hardcoded version 43 into our code and this will cause
> >our
> >> code to break again when version 44 is released. Once this issue
> >> is resolved we can go back to using the response from the REST
> >API
> >> to determine the version so that our code handles the release of
> >> version 44 seamlessly.
> >>
> >> Thanks,
> >>
> >> - Kurt
> >>
> >> On Wed, May 15, 2019 at 5:23 AM Kieron Taylor <ktaylor at ebi.ac.uk
> >> <mailto:ktaylor at ebi.ac.uk>> wrote:
> >>
> >> Hi Kurt,
> >>
> >> It looks like a post-release hot fix has brought in some
> >extra
> >> metadata that was intended for the future. There is no
> >impact
> >> on the biological data, only the reported version is
> >> incorrect. The webteam is aware and will sort it out as soon
> >> as possible.
> >>
> >> Thank you for bringing up the issue, regards,
> >>
> >> Kieron
> >>
> >>
> >> Kieron Taylor PhD.
> >> Ensembl Developer
> >>
> >> EMBL, European Bioinformatics Institute
> >>
> >>
> >>
> >>
> >>
> >>
> >> > On 14 May 2019, at 17:36, Kurt Wheeler
> >> <kurt.wheeler91 at gmail.com <mailto:kurt.wheeler91 at gmail.com>>
> >> wrote:
> >> >
> >> > Hey are these still the latest versions?
> >> https://rest.ensembl.org/documentation/info/eg_version is
> >> returning:
> >> >
> >> > {
> >> > "
> >> > version": 44
> >> > }
> >> >
> >> > Which seems to be breaking some code because this leads us
> >> to try to pull files from URLs such as
> >>
> >
> ftp://ftp.ensemblgenomes.org/pub/metazoa/release-44/fasta/anopheles_gambiae/dna/
> >> instead of
> >>
> >
> ftp://ftp.ensemblgenomes.org/pub/metazoa/release-43/fasta/anopheles_gambiae/dna/.
> >> >
> >> > Thanks!
> >> >
> >> > On Tue, Apr 9, 2019 at 8:01 AM Astrid Gall
> ><agall at ebi.ac.uk
> >> <mailto:agall at ebi.ac.uk>> wrote:
> >> > Dear all
> >> >
> >> > We are pleased to announce that the latest Ensembl and
> >> Ensembl Genomes updates have been released:
> >> > http://www.ensembl.org/
> >> > http://ensemblgenomes.org
> >> >
> >> >
> >> > Highlights of this release include:
> >> > • First-pass full annotation of the mouse genome
> >> (GENCODE M21 gene set)
> >> > • Release of Ensembl-RefSeq MANE Select v0.5
> >transcripts
> >> > • Update to GENCODE 30 for human
> >> > • Joint REST server for Ensembl and Ensembl Genomes
> >> > • Changes to FTP directory layout
> >> > • New genomes: 19 birds, five reptiles and 12
> >mammals
> >> > • New interface for configuration of regulation
> >tracks
> >> >
> >> >
> >> > The release blog post with all news can be viewed here:
> >> >
> >>
> >
> http://www.ensembl.info/2019/04/09/ensembl-96-and-ensembl-genomes-43-are-out/
> >> >
> >> > For the latest news from the Ensembl project visit our
> >blog at:
> >> > http://www.ensembl.info
> >> >
> >> > The release webinar is planned for Wednesday 17th April
> >2019
> >> at 16:00 BST. Please register using the following URL:
> >> > https://attendee.gototraining.com/r/8260823671959775489
> >> > Registration is free.
> >> >
> >> > Best regards,
> >> >
> >> > Astrid
> >> > On behalf of the Ensembl team
> >> > --
> >> > Dr Astrid Gall
> >> > Ensembl Outreach Officer
> >> > European Molecular Biology Laboratory - European
> >> Bioinformatics Institute (EMBL-EBI)
> >> > Wellcome Genome Campus
> >> > Hinxton, Cambridge
> >> > CB10 1SD
> >> > United Kingdom
> >> >
> >> >
> >> >
> >> >
> >> > _______________________________________________
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> >>
> >>
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