[ensembl-dev] can you put me off the list?
Wallace Ko
myko at l3-bioinfo.com
Tue May 21 11:39:50 BST 2019
Hi Matteo and Gwang-Jin,
The link in the email footer is indeed dead for me too. You can visit
https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org to unsubscribe
from the list. If you still have problem, please contact
mailman at mail.ensembl.org instead.
Regards,
Wallace Ko
On Tue, May 21, 2019 at 6:32 PM Matteo Pallocca <matteo.pallocca at gmail.com>
wrote:
>
> Dear all,
>
> I confirm the issue of the unsubscribe function :)
>
> all the best
> MP
>
> Il giorno mar 21 mag 2019 alle ore 11:20 Gwang-Jin Kim <
> gwang-jin.kim at pharmakol.uni-freiburg.de> ha scritto:
>
>> Hello,
>>
>> can you put me off the Ensembl developers list? I subscribed
>> accidentally.
>> The unsubscribe link is dead for me (please repair). And marking as
>> spam didn't help.
>>
>> Best,
>> Gwang-Jin
>>
>> On Tue, 21 May 2019 08:30:22 +0100
>> Nick Langridge <nickl at ebi.ac.uk> wrote:
>> >Hi Kurt,
>> >
>> >Indeed it has now been fixed - it was done late yesterday and I didn't
>> >get a chance to announce it. Sorry for any inconvnience caused.
>> >
>> >The issue arose out teething problems with a new release process and
>> >we hope to avoid a recurrance in the future.
>> >
>> >Thanks for your patience.
>> >
>> >Best regards,
>> >Nick
>> >
>> >On 20/05/2019 19:06, Kurt Wheeler wrote:
>> >> If anyone else was affected by this bug it looks like it's been
>> >fixed now.
>> >>
>> >> On Wed, May 15, 2019 at 10:40 AM Kurt Wheeler
>> ><kurt.wheeler91 at gmail.com <mailto:kurt.wheeler91 at gmail.com>> wrote:
>> >>
>> >> Hi Kieron,
>> >>
>> >> Is there any way we can be alerted when this issue is corrected?
>> >> Maybe an issue or bug report we can subscribe to?
>> >>
>> >> We have hardcoded version 43 into our code and this will cause
>> >our
>> >> code to break again when version 44 is released. Once this issue
>> >> is resolved we can go back to using the response from the REST
>> >API
>> >> to determine the version so that our code handles the release of
>> >> version 44 seamlessly.
>> >>
>> >> Thanks,
>> >>
>> >> - Kurt
>> >>
>> >> On Wed, May 15, 2019 at 5:23 AM Kieron Taylor <ktaylor at ebi.ac.uk
>> >> <mailto:ktaylor at ebi.ac.uk>> wrote:
>> >>
>> >> Hi Kurt,
>> >>
>> >> It looks like a post-release hot fix has brought in some
>> >extra
>> >> metadata that was intended for the future. There is no
>> >impact
>> >> on the biological data, only the reported version is
>> >> incorrect. The webteam is aware and will sort it out as soon
>> >> as possible.
>> >>
>> >> Thank you for bringing up the issue, regards,
>> >>
>> >> Kieron
>> >>
>> >>
>> >> Kieron Taylor PhD.
>> >> Ensembl Developer
>> >>
>> >> EMBL, European Bioinformatics Institute
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >> > On 14 May 2019, at 17:36, Kurt Wheeler
>> >> <kurt.wheeler91 at gmail.com <mailto:kurt.wheeler91 at gmail.com>>
>> >> wrote:
>> >> >
>> >> > Hey are these still the latest versions?
>> >> https://rest.ensembl.org/documentation/info/eg_version is
>> >> returning:
>> >> >
>> >> > {
>> >> > "
>> >> > version": 44
>> >> > }
>> >> >
>> >> > Which seems to be breaking some code because this leads us
>> >> to try to pull files from URLs such as
>> >>
>> >
>>
>> ftp://ftp.ensemblgenomes.org/pub/metazoa/release-44/fasta/anopheles_gambiae/dna/
>> >> instead of
>> >>
>> >
>>
>> ftp://ftp.ensemblgenomes.org/pub/metazoa/release-43/fasta/anopheles_gambiae/dna/
>> .
>> >> >
>> >> > Thanks!
>> >> >
>> >> > On Tue, Apr 9, 2019 at 8:01 AM Astrid Gall
>> ><agall at ebi.ac.uk
>> >> <mailto:agall at ebi.ac.uk>> wrote:
>> >> > Dear all
>> >> >
>> >> > We are pleased to announce that the latest Ensembl and
>> >> Ensembl Genomes updates have been released:
>> >> > http://www.ensembl.org/
>> >> > http://ensemblgenomes.org
>> >> >
>> >> >
>> >> > Highlights of this release include:
>> >> > • First-pass full annotation of the mouse genome
>> >> (GENCODE M21 gene set)
>> >> > • Release of Ensembl-RefSeq MANE Select v0.5
>> >transcripts
>> >> > • Update to GENCODE 30 for human
>> >> > • Joint REST server for Ensembl and Ensembl Genomes
>> >> > • Changes to FTP directory layout
>> >> > • New genomes: 19 birds, five reptiles and 12
>> >mammals
>> >> > • New interface for configuration of regulation
>> >tracks
>> >> >
>> >> >
>> >> > The release blog post with all news can be viewed here:
>> >> >
>> >>
>> >
>>
>> http://www.ensembl.info/2019/04/09/ensembl-96-and-ensembl-genomes-43-are-out/
>> >> >
>> >> > For the latest news from the Ensembl project visit our
>> >blog at:
>> >> > http://www.ensembl.info
>> >> >
>> >> > The release webinar is planned for Wednesday 17th April
>> >2019
>> >> at 16:00 BST. Please register using the following URL:
>> >> > https://attendee.gototraining.com/r/8260823671959775489
>> >> > Registration is free.
>> >> >
>> >> > Best regards,
>> >> >
>> >> > Astrid
>> >> > On behalf of the Ensembl team
>> >> > --
>> >> > Dr Astrid Gall
>> >> > Ensembl Outreach Officer
>> >> > European Molecular Biology Laboratory - European
>> >> Bioinformatics Institute (EMBL-EBI)
>> >> > Wellcome Genome Campus
>> >> > Hinxton, Cambridge
>> >> > CB10 1SD
>> >> > United Kingdom
>> >> >
>> >> >
>> >> >
>> >> >
>> >> > _______________________________________________
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>> >>
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