[ensembl-dev] problem git installation bioperl

[Ed Gray]

Julien,
We're you using Ubuntu 14?
Ed


Sent from my Smartphone

<div>-------- Original message --------</div><div>From: Julien Roux <julien.roux at unil.ch> </div><div>Date:12/18/2014  7:07 AM  (GMT-05:00) </div><div>To: Ensembl developers list <dev at ensembl.org> </div><div>Subject: [ensembl-dev] problem git installation bioperl </div><div>
</div>
Dear list,

I wanted to let you know that the installation of bioperl from Git (git
clone https://github.com/bioperl/bioperl-live.git) seems to be missing
some files, which leads to an error message when using the Ensembl API
For example folder bioperl-live/Bio/Root/ does not include Root.pm, it
includes only a script HTTPget.pm

Installing from the archive at
http://bioperl.org/DIST/BioPerl-1.6.1.tar.gz solved the problem since
all files are included now.

Regards,
Julien

--
Julien Roux
Marie-Curie postdoctoral fellow
Department of Ecology and Evolution, University of Lausanne, Switzerland
http://www.unil.ch/dee/home/menuinst/people/post-docs--associates/dr-julien-roux.html
Tel: +41 78 700 2931


_______________________________________________
Dev mailing list    Dev at ensembl.org
Posting guidelines and subscribe/unsubscribe info: http://lists.ensembl.org/mailman/listinfo/dev
Ensembl Blog: http://www.ensembl.info/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20141218/6133eeac/attachment.html>