[ensembl-dev] problem git installation bioperl

[Julien Roux]

OK the checkout works, thanks!

Ed, I am using mac OSX 10.7.5

Best
Julien

On 12/18/14 3:55 PM, dev-request at ensembl.org wrote:
> Date: Thu, 18 Dec 2014 08:46:45 -0500
> From: Ed Gray<gray_ed at hotmail.com>
> Subject: Re: [ensembl-dev] problem git installation bioperl
> To: Ensembl developers list<dev at ensembl.org>
> Message-ID:<SNT406-EAS324669B8B1A416151D90C009C6A0 at phx.gbl>
> Content-Type: text/plain; charset="utf-8"
>
> Julien,
> We're you using Ubuntu 14?
> Ed
>
>
> Sent from my Smartphone
>
> <div>-------- Original message --------</div><div>From: Julien Roux<julien.roux at unil.ch>  </div><div>Date:12/18/2014  7:07 AM  (GMT-05:00) </div><div>To: Ensembl developers list<dev at ensembl.org>  </div><div>Subject: [ensembl-dev] problem git installation bioperl </div><div>
> </div>
> Dear list,
>
> I wanted to let you know that the installation of bioperl from Git (git
> clonehttps://github.com/bioperl/bioperl-live.git) seems to be missing
> some files, which leads to an error message when using the Ensembl API
> For example folder bioperl-live/Bio/Root/ does not include Root.pm, it
> includes only a script HTTPget.pm
>
> Installing from the archive at
> http://bioperl.org/DIST/BioPerl-1.6.1.tar.gz  solved the problem since
> all files are included now.
>
> Regards,
> Julien

-- 
Julien Roux
Marie-Curie postdoctoral fellow
Department of Ecology and Evolution, University of Lausanne, Switzerland
http://www.unil.ch/dee/home/menuinst/people/post-docs--associates/dr-julien-roux.html
Tel: +41 78 700 2931