[ensembl-dev] [SPAM] - Re: Transcript variation alleles - Email found in subject

Oliver, Gavin gavin.oliver at almacgroup.com
Wed Feb 2 15:20:24 GMT 2011


Thanks Graham - 

Can you also tell me where to find information on the meaning of the
possible validation statuses?



-----Original Message-----
From: Graham Ritchie [mailto:grsr at ebi.ac.uk] 
Sent: 02 February 2011 15:12
To: Oliver, Gavin
Cc: dev at ensembl.org
Subject: [SPAM] - Re: [ensembl-dev] Transcript variation alleles - Email
found in subject

Hi Gavin,

The alleles of a transcript variation always represent the genomic base
change.

Cheers,

Graham

Ensembl variation


On 2 Feb 2011, at 15:02, Oliver, Gavin wrote:

> Hi,
>  
> When I pull transcript variation alleles via the API, does the allele
shown (e.g. A/T) represent the genomic base change, or the
transcriptomic one?
>  
> Gavin
>  
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