[ensembl-dev] problem installing ensembl_compara_61

[Fedor Gusev]

I've run into similar issues and solved them by splitting dumps into
smaller files and importing them one by one.

On Wed, Apr 13, 2011 at 9:43 AM, Jeff Hussmann <jeff.hussmann at gmail.com> wrote:
> Hello all -
>
> I am trying to install a local mysql copy of ensembl_compara_61. Everything
> goes fine until my script attempts to import the file
> peptide_align_feature_mus_musculus_57.txt into mysql (as part of executing
> the command "mysqlimport -u root --password=$password --fields_escaped_by=\\
> $database -L $base_directory/$database/*.txt #>> $log_file_name") at which
> point I get the error message
>
> "mysqlimport: Error: 1016, Can't open file:
> './ensembl_compara_61/peptide_align_feature_mus_musculus_57.frm' (errno:
> 24), when using table: peptide_align_feature_mus_musculus_57".
>
> Every peptide_align_feature_*.txt alphabetically before mus_musculus imports
> without complaint (and installation of ensembl_compara_60 several months ago
> on a different machine went smoothly).
>
> Any idea what is going wrong?
>
>  - Jeff
>
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-- 
Kind regards,
Fedor Gusev.