[ensembl-dev] Attaching URL data

[Eugene Kulesha]

Hi Ken

the SeqID in the file is 'rice_3514',
but it needs to refer directly to the chromosme eg. '1'.
You can find a working example here :http://www.ebi.ac.uk/~nickl/gff/gff3.gff

regards

Eugene


On 24/09/2010 15:57, Ken Youens-Clark wrote:
> I have a question about uploading a GFF file of annotations to the genome browser.  If I go here:
>
> 	http://plants.ensembl.org/Oryza_sativa/Location/View?r=1:1-100000
>
> And choose "Manage your data" and then "Upload Data" or "Attach URL Data" and then indicate this file:
>
> 	http://dnasubway.iplantcollaborative.org/files/projects_files/0DBA/gff3.gff
>
> I get a message that seems to indicate all is well, and yet I see no features.  Can you advise, please?
>
> --
> Ken Youens-Clark
> kclark at cshl.edu
> Gramene.org Project Manager
> Ware Lab/CSHL/USDA-ARS
>
>
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