[ensembl-dev] Attaching URL data

[Ken Youens-Clark]

Yes, someone else pointed that out off-list.  It does work now.  Thanks!

ky

On Sep 29, 2010, at 8:13 AM, Eugene Kulesha wrote:

> Hi Ken
> 
> the SeqID in the file is 'rice_3514',
> but it needs to refer directly to the chromosme eg. '1'.
> You can find a working example here :http://www.ebi.ac.uk/~nickl/gff/gff3.gff
> 
> regards
> 
> Eugene
> 
> 
> On 24/09/2010 15:57, Ken Youens-Clark wrote:
>> I have a question about uploading a GFF file of annotations to the genome browser.  If I go here:
>> 
>> 	http://plants.ensembl.org/Oryza_sativa/Location/View?r=1:1-100000
>> 
>> And choose "Manage your data" and then "Upload Data" or "Attach URL Data" and then indicate this file:
>> 
>> 	http://dnasubway.iplantcollaborative.org/files/projects_files/0DBA/gff3.gff
>> 
>> I get a message that seems to indicate all is well, and yet I see no features.  Can you advise, please?
>> 
>> --
>> Ken Youens-Clark
>> kclark at cshl.edu
>> Gramene.org Project Manager
>> Ware Lab/CSHL/USDA-ARS
>> 
>> 
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> 
> 
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--
Ken Youens-Clark
kclark at cshl.edu
Gramene.org Project Manager
Ware Lab/CSHL/USDA-ARS