[ensembl-dev] GEMJ population variation database access

[Diana Lemos]

Hi Duarte,

Thanks for contacting us. To answer your question, the best way to 
access this data is through the rest api (https://rest.ensembl.org/), 
the user guide is here (https://github.com/Ensembl/ensembl-rest/wiki).

You can access frequency data with the vep endpoint using option pops=1. 
However, if you can specify your use case we can probably help advise 
further.


Best wishes,

Diana


On 22/11/2021 14:44, Duarte Molha wrote:
> Hi
>
> I was interested in accessing the GEMJ variation data you have in the 
> population genetics section
> It does not seem to be available in Biomart
>
> Can you point me in the right direction on how to access it either in 
> perl api or rest api?
>
> Thanks
>
> Duarte
>
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