[ensembl-dev] Ensembl REST API | GET eqtl/tissue/:species/

[Daniel Zerbino]

Hello Ramiro,

We have a test server up and running, just waiting for the green light 
to deploy onto production.

Cheers,

Daniel

On 05/11/2019 19:47, Ramiro Magno wrote:
> Hi Daniel,
>
> No pressure intended... but how is it going? :)
>
> On Wed, 9 Oct 2019 at 15:58, Ramiro Magno <ramiro.magno at gmail.com 
> <mailto:ramiro.magno at gmail.com>> wrote:
>
>     Great, thanks for the update!
>
>     On Wed, 9 Oct 2019 at 15:40, Daniel Zerbino <zerbino at ebi.ac.uk
>     <mailto:zerbino at ebi.ac.uk>> wrote:
>
>         Hello Ramiro,
>
>         We are *this* close to a release, hopefully less that 2 weeks
>         away.
>
>         Cheers,
>
>         Daniel
>
>         On 09/10/2019 15:02, Ramiro Magno wrote:
>>         Hi Thomas,
>>
>>         Got any update on the new eQTL server:
>>         https://www.ebi.ac.uk/eqtl ?
>>
>>         RM
>>
>>         On Wed, 11 Sep 2019 at 17:22, Ramiro Magno
>>         <ramiro.magno at gmail.com <mailto:ramiro.magno at gmail.com>> wrote:
>>
>>             Hi Thomas,
>>
>>             Thank you for your quick response. Let's wait for that
>>             new service then!
>>
>>             All the best,
>>             Ramiro
>>
>>
>>
>>             On Wed, 11 Sep 2019 at 17:05, Thomas Juettemann
>>             <juettemann at ebi.ac.uk <mailto:juettemann at ebi.ac.uk>> wrote:
>>
>>                 Hello Ramiro,
>>
>>                 Thanks for your message. I agree with your points.
>>                 The eQTL adaptor was the first endpoint that I
>>                 created, certainly room for improvement. ;-)
>>
>>                 eQTLs are moving to a different team, and a new
>>                 dedicated eQTL server is work in progress, The beta
>>                 server  should be available in latest a month at this
>>                 URL:
>>                 https://www.ebi.ac.uk/eqtl
>>                 It is currently returning 404, but will be active
>>                 soon. There will be a new API for you to play with if
>>                 you are interested.
>>
>>                 For that reason we will not expand these endpoints
>>                 further, I hope that makes sense.
>>
>>                 Thank you for going through them in such detail, that
>>                 is much appreciated.
>>                 Please let me know if you have any further questions.
>>
>>                 All the best,
>>                 Thomas
>>
>>
>>                 On 11 Sep 2019, at 12:00, Ramiro Magno
>>                 <ramiro.magno at gmail.com
>>                 <mailto:ramiro.magno at gmail.com>> wrote:
>>
>>                 Hi Devs,
>>
>>                 I have a few questions about the endpoint
>>                 "eqtl/tissue/:species/".
>>
>>                 Q1: The doc
>>                 (https://rest.ensembl.org/documentation/info/tissues
>>                 <https://rest.ensembl.org/documentation/info/tissues>)
>>                 indicates that there are no required parameters but
>>                 that is a mistake, right? It always needs the species
>>                 name, correct?
>>
>>                 Q2: Can I use this endpoint with other species than
>>                 human? I tried with ovis_aries and capra_hircus but
>>                 got a funny error: "error: No EQTL adaptor available".
>>
>>                 Q3: About the json output, the json is a list
>>                 key/value pairs, with tissue name being the key and
>>                 value being (always?) 1. Can the value in any
>>                 circumstance be different from 1? If not, may I ask
>>                 why this specific design choice? Why not simply
>>                 return an array of tissue names?
>>
>>                 As always, many thanks in advance, Ramiro Magno
>>                 _______________________________________________
>>                 Dev mailing list Dev at ensembl.org <mailto:Dev at ensembl.org>
>>                 Posting guidelines and subscribe/unsubscribe info:
>>                 https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org
>>                 Ensembl Blog: http://www.ensembl.info/
>>
>>
>>                 _______________________________________________
>>                 Dev mailing list Dev at ensembl.org <mailto:Dev at ensembl.org>
>>                 Posting guidelines and subscribe/unsubscribe info:
>>                 https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org
>>                 Ensembl Blog: http://www.ensembl.info/
>>
>>
>>         _______________________________________________
>>         Dev mailing listDev at ensembl.org  <mailto:Dev at ensembl.org>
>>         Posting guidelines and subscribe/unsubscribe info:https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org
>>         Ensembl Blog:http://www.ensembl.info/
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20191106/fd581254/attachment.html>