[ensembl-dev] Ensembl REST API | Imprecision in documentation of ld/:species/region/:region/:population_name?

[Ramiro Magno]

Hi Anja,

Thanks again! I am going to look at that Perl script :)

Cheers, RM

On Thu, 18 Jul 2019 at 10:30, Anja Thormann <anja at ebi.ac.uk> wrote:

> Hi Ramiro,
>
> thank you for reporting this. We reduced the maximum allowed region size
> because of timeout problems we encountered for larger regions. We will need
> to update our documentation accordingly. If you want to work with larger
> regions I recommend using our LD perl script
> <https://github.com/Ensembl/ensembl-variation/tree/release/97/tools/linkage_disequilibrium>
> .
>
> Best wishes,
> Anja
>
> On 17 Jul 2019, at 17:59, Ramiro Magno <ramiro.magno at gmail.com> wrote:
>
> Hi :)
>
> The documentation http://rest.ensembl.org/documentation/info/ld_region_get says
> the query region max size is 1Mb.
>
> Yet
> https://rest.ensembl.org/ld/human/region/1:1..500001/1000GENOMES:phase_3:CEU?
>  returns:
>
> a 400 response: error: "Specified region is too large. Maximum allowed
> size for region is 500KB."
>
> Best regards, RM
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