[ensembl-dev] strange result retreiving SNP information

[Ben Moore]

Hi Duarte,

I’ve tried to replicate the error, but the link you provided is currently working for me. We think this may be an intermittent problem, so please try again. Please do let us know if you experience the error again, and we will investigate in more detail.

We apologise for any inconvenience you’ve experienced.

Best wishes

Ben

> On 30 Jan 2019, at 13:03, Duarte Molha <duartemolha at gmail.com> wrote:
> 
> Hi
> 
> The variant rs1136447 displays an error message on the genome browser
> 
> 
> http://www.ensembl.org/Homo_sapiens/Variation/Explore?r=X:2713941-2714941;v=rs1136447;vdb=variation;vf=15843063 <http://www.ensembl.org/Homo_sapiens/Variation/Explore?r=X:2713941-2714941;v=rs1136447;vdb=variation;vf=15843063>
> 
> and it displays a runtime error displaying the variant 
> 
> Runtime Error in component "EnsEMBL::Web::Component::Variation::Summary [content]"
> 
> Function EnsEMBL::Web::Component::Variation::Summary fails to execute due to the following error:
> 
> 	Can't call method "close" on unblessed reference at
> 	... /nfs/public/release/ensweb/latest/live/www/www_95/ensembl-io/modules/Bio/EnsEMBL/IO/TabixParser.pm line
> 	... 121.
> Can you tell me what might be wrong?
> 
> Thanks
> 
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Ben Moore
Ensembl Outreach Officer

European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge
CB10 1SD
UK

bmoore at ebi.ac.uk
+44 (0)1223 494265

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