[ensembl-dev] Fwd: Rest API problem: variant records not working for some ids like rs730880918

[Natàlia Padilla Sirera]

Hi Andrew,

I also had problems with ENSG00000092054, ENSG00000103197, ENSG00000196712.

Best regards,

Natàlia

    Natàlia Padilla Sirera
LinkedIn <https://www.linkedin.com/in/natàlia-padilla-sirera-8112305a/> |
ResearchGate <https://www.researchgate.net/profile/Natalia_Padilla3> | ORCID
<http://orcid.org/0000-0002-7872-2279>

Translational Bioinformatics
Vall d'Hebron Institut de Recerca (VHIR)

Mòdul VHIR
Paseig de la Vall d'Hebron 119-129
08035 Barcelona, Spain
+34 934894101 ext 2688
www.vhir.org

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On 18 July 2018 at 12:11, Andrew Parton <aparton at ebi.ac.uk> wrote:

> Hi Natàlia
>
> Thank you for this. In this particular instance, it looks like the ensembl
> API is having trouble with the associated RefSeq transcript NM_000257,
> preventing Variant Recoder from returning a sensible result. We’re
> currently looking into it.
>
> Do you know of other rsIDs where you’re seeing the same issue? This might
> help our debugging process.
>
> Kind Regards,
> Andrew
>
>
> > On 18 Jul 2018, at 10:29, Natàlia Padilla Sirera <
> padilla.sirera at gmail.com> wrote:
> >
> >
> >
> > Dear Sir or Madame,
> >
> > First of all, thanks for all your hard work in making Ensembl work. I
> would like to ask about the behaviour of the REST API. Since I tried to
> download some of the variants_records and is failing in some of the rsIDs
> like rs730880918. I tried these commands and none work. How should I do it?
> >
> > wget -q --header='Content-type:application/json' '
> http://rest.ensembl.org/variant_recoder/human/rs730880918?'  -O -
> >
> > wget  -q --header='Content-type:application/json'
> --header='Accept:application/json' --post-data='{ "ids" : ["rs730880918"]
> }' 'http://rest.ensembl.org/variant_recoder/homo_sapiens'  -O -
> >
> > Thanks,
> >
> > Natàlia
> >
> >     Natàlia Padilla Sirera
> > LinkedIn | ResearchGate | ORCID
> >
> > Translational Bioinformatics
> > Vall d'Hebron Institut de Recerca (VHIR)
> >
> > Mòdul VHIR
> > Paseig de la Vall d'Hebron 119-129
> > 08035 Barcelona, Spain
> > +34 934894101 ext 2688
> > www.vhir.org
> >
> > This message and any attachments included are confidential and intended
> for the recipient only. If you are not the intended recipient of this
> message, please notify the sender immediately, and delete the message and
> any attachments. Any disclosure, reproduction or distribution of this
> message or any attachments is prohibited.
> > --
> >     Natàlia Padilla Sirera
> > LinkedIn | ResearchGate | ORCID
> >
> > Translational Bioinformatics
> > Vall d'Hebron Institut de Recerca (VHIR)
> >
> > Mòdul VHIR
> > Paseig de la Vall d'Hebron 119-129
> > 08035 Barcelona, Spain
> > +34 934894101 ext 2688
> > www.vhir.org
> >
> > This message and any attachments included are confidential and intended
> for the recipient only. If you are not the intended recipient of this
> message, please notify the sender immediately, and delete the message and
> any attachments. Any disclosure, reproduction or distribution of this
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