[ensembl-dev] Ensembl Mirror Install - BioMart Installation
Matthew Laird
lairdm at ebi.ac.uk
Wed Jan 10 13:40:41 GMT 2018
Hello Rehaman,
Unfortunately I think you've misunderstood what the installation
instructions are trying to say. We no longer recommend the local
installation of BioMart as part of a local mirror, and when the
documentation says to link to a public BioMart, it means to run your
queries against a public BioMart and Ensembl database. There isn't a way
to have our public BioMart instances talk to your private server. If you
need to do large queries against a local Ensembl mirror, you're better
off using the API in that case.
Please let us know if you have any further questions. Cheers.
On 10/01/18 10:46, Rehaman wrote:
> Dear Team,
>
> We are configuring Ensembl mirror locally in our environment as per
> instructions.
> Now we need to install BioMart. In Documentation, It is saying that it
> is not recommended to install.
>
> Could you please let us know the process of linking public BioMart.to
> ensembl local server?
>
> Thanks in advance
> Rehaman
>
>
> _______________________________________________
> Dev mailing list Dev at ensembl.org
> Posting guidelines and subscribe/unsubscribe info: http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20180110/1e855686/attachment.html>
More information about the Dev
mailing list