[ensembl-dev] Missing attributes in BioMart for Ensembl version 90
mag
mr6 at ebi.ac.uk
Fri Aug 25 08:46:12 BST 2017
Hi Thomas,
The status field for genes and transcripts has been retired, as
announced by Andy Yates back in April
(http://lists.ensembl.org/pipermail/dev/2017-April/012421.html)
The version 90 BioMart is the final product, containing all data
generated for release 90.
Hope that helps,
Magali
On 24/08/2017 21:58, Thomas Danhorn wrote:
> Hi,
>
> I noticed that some of the BioMart attributes (specifically in Ensembl
> Genes -> Mouse Genes) available in previous Ensembl versions are
> missing in the current version, e.g. "Status (gene)" (under GENE), and
> "Transmembrane helices" (under PROTEIN DOMAINS AND FAMILIES: ->
> Protein features).
>
> Is the version 90 BioMart still a work in progress, or were these
> attributes removed deliberately? If the former, when can we expect
> them to be added, and if the latter, why?
>
> Thank you very much for your help!
>
> Thomas
>
> NOTICE: This email message is for the sole use of the intended
> recipient(s) and may contain confidential and privileged information.
> Any unauthorized review, use, disclosure or distribution is
> prohibited. If you are not the intended recipient, please contact the
> sender by reply email and destroy all copies of the original message.
> _______________________________________________
> Dev mailing list Dev at ensembl.org
> Posting guidelines and subscribe/unsubscribe info:
> http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/
More information about the Dev
mailing list