[ensembl-dev] BED file format on custom track

[Anne Lyle]

Hi Liam

BED should be fine - I’ll have a look at your file and see if there’s some reason it’s breaking our validator. The validation is quite new code, so there may be an error in its logic.

Cheers

Anne

 
> On 5 Oct 2016, at 19:01, Liam Thompson <dejmail at gmail.com> wrote:
> 
> Hi Anne
> 
> Thanks for the reply. I'm working from a Linux system, but not sure that
> makes any difference.
> 
> I have just tried it on Firefox v. 49, and the uploader just doesn't
> seem to go anywhere, so I can confirm that behaviour. It also happens in
> Private mode, so it's not a plugin.
> 
> I tried in Google Chrome (53.0.2785.143 (64-bit)) normal and
> Private/Incognito mode and the same thing happens.
> 
> Is there another file format you would recommend that I can use to
> display short sequences of interest in a track in the genome browser ?
> 
> Kind regards
> Liam
> 
> 
>> ------------------------------
>> 
>> Message: 2
>> Date: Wed, 5 Oct 2016 17:14:57 +0100
>> From: Anne Lyle <annelyle at ebi.ac.uk>
>> Subject: Re: [ensembl-dev] BED file format on custom track
>> To: Ensembl developers list <dev at ensembl.org>
>> Message-ID: <3FBA2DBE-8EB3-4317-9785-A1FD61902772 at ebi.ac.uk>
>> Content-Type: text/plain; charset=utf-8
>> 
>> Hi Liam
>> 
>> Are you using Firefox (version 49) by any chance? We?ve seen some upload issues in this browser, so it could be related. If not, I?ll have a look at your file and see if there?s any reason why our parser isn?t reading it correctly.
>> 
>> Cheers
>> 
>> Anne
> 
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