[ensembl-dev] How to find transcript parent in ensemblgenomes via REST

[Nick Langridge]

Hi Mungo,

Thanks for bringing this to our attention.
It looks like an unintended consequence of changes in the Ensembl 
Genomes fork of the REST code.
We hope to resolve this issue for the next release which is due mid March.

Best regards,
Nick

Ensembl Genomes Web Team
EMBL, European Bioinformatics Institute

On 04/03/2016 10:18, Mungo Carstairs (Staff) wrote:
>
> Hi,
>
>
> In Ensembl I can find the parent gene for a transcript by (e.g.)
>
> http://rest.ensembl.org/lookup/id/ENST00000457928?content-type=text/xml
>
>
> The same in EnsemblGenomes doesn't return a Parent for the case I tried:
>
> http://rest.ensemblgenomes.org/lookup/id/DDB0232420?content-type=text/xml
>
>
> I had hoped to get Parent="DDB_G0283883"
>
> Is there a way to do this via REST?
>
>
> thanks,
>
>
> Mungo
>
>
> Mungo Carstairs
> Jalview Computational Scientist
> The Barton Group
> Division of Computational Biology
> School of Life Sciences
> University of Dundee, Dundee, Scotland, UK.
> www.jalview.org <http://www.jalview.org/>
> www.compbio.dundee.ac.uk <http://www.compbio.dundee.ac.uk/>
>
> The University of Dundee is a registered Scottish Charity, No: SC015096
>
>
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