[ensembl-dev] How to find transcript parent in ensemblgenomes via REST

Mungo Carstairs (Staff) g.m.carstairs at dundee.ac.uk
Fri Mar 4 10:18:57 GMT 2016


Hi,


In Ensembl I can find the parent gene for a transcript by (e.g.)

http://rest.ensembl.org/lookup/id/ENST00000457928?content-type=text/xml


The same in EnsemblGenomes doesn't return a Parent for the case I tried:

http://rest.ensemblgenomes.org/lookup/id/DDB0232420?content-type=text/xml


I had hoped to get Parent="DDB_G0283883"

Is there a way to do this via REST?


thanks,


Mungo


Mungo Carstairs
Jalview Computational Scientist
The Barton Group
Division of Computational Biology
School of Life Sciences
University of Dundee, Dundee, Scotland, UK.
www.jalview.org<http://www.jalview.org/>
www.compbio.dundee.ac.uk<http://www.compbio.dundee.ac.uk/>

The University of Dundee is a registered Scottish Charity, No: SC015096
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