[ensembl-dev] Question about 'source' of sequence_variant in REST /overlap

[Sarah Hunt]

Hi Mungo,


Thanks for the good suggestion - we will do this for our next release.


Best wishes,


Sarah


On 17/08/2016 14:07, Mungo Carstairs (Staff) wrote:
>
> Hi,
>
>
> Would it be possible to provide the source of variant data in the GFF 
> 'source' column (column 2)?
>
>
> Currently this is just a '.', as for example in 
> http://rest.ensembl.org/overlap/id/ENST00000288602?content-type=text/x-gff3&feature=variation.
>
>
> This would be of interest to us, for example to allow Jalview users to 
> analyse or filter visualisations based on source of variation data.
>
>
> Thanks,
>
>
> Mungo
>
>
> Mungo Carstairs
> Jalview Computational Scientist
> The Barton Group
> Division of Computational Biology
> School of Life Sciences
> University of Dundee, Dundee, Scotland, UK.
> www.jalview.org <http://www.jalview.org/>
> www.compbio.dundee.ac.uk <http://www.compbio.dundee.ac.uk/>
>
> The University of Dundee is a registered Scottish Charity, No: SC015096
>
>
> _______________________________________________
> Dev mailing list    Dev at ensembl.org
> Posting guidelines and subscribe/unsubscribe info: http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20160822/fb8ff78c/attachment.html>