[ensembl-dev] VEP print summary of cache database

[Will McLaren]

Hi Hans,

They are serialized with Storable (with an option to convert to Sereal with
convert_cache.pl).

The methods Bio::EnsEMBL::Variation::Utils::VEP::serialize_to_file and
::deserialize_from_file are a good place to look (though they are not
exported, you'll have to look up the code yourself).

Cheers

Will

On 8 April 2016 at 21:16, Hans Vasquez-Gross <havasquezgross at ucdavis.edu>
wrote:

> Hi Will,
>
> I may try reading the serialized objects with Perl just to see the storage
> structure.  What did you use to do create these objects? Storable,
> Data::Dumper, Sereal, Data::Serializer, other?  I'll read up on the
> documentation and see if I can put something together.
>
> Cheers,
> -Hans
>
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