[ensembl-dev] ENSEMBL | Issue in downloading ftp.ensembl.org/release-79/mysql/*/*.sql.gz file

[Amonida Zadissa]

Hi Swapnika,

Sorry for the late reply. The FTP site has now been updated and the 
files have correct permission.

Please let us know if you encounter any further issues.

Apologies for the inconvenience.

Best regards,
Amonida

On 25/03/2015 12:37, Amonida Zadissa wrote:
> Hi Swapnika,
>
> Thanks for bringing this to our attention. We are now working to fix
> this issue and will let you know once it has been resolved.
>
> Best regards,
> Amonida
>
> On 24/03/2015 10:42, Mekala, Swapnika (Ext) wrote:
>> Hi,
>>
>>
>>
>> CHECKSUM.gz file has been downloaded properly, thanks for the fix
>> provided.
>>
>>
>>
>> Now we face problem with *.sql.gz file in all the organism folders.
>> After data download, while performing the integrity check, we get the
>> following error:
>>
>>
>>
>> "vicugna_pacos_core_79_1.sql.gz was meant to have a checksum of 36887
>> 5 but got 17749 5 in
>> .../ensembl/release-79/mysql/vicugna_pacos_core_79_1"
>>
>>
>>
>> Could you please look into this?
>>
>>
>>
>> Thanks & Regards,
>>
>> Swapnika
>>
>>
>>
>> -----Original Message-----
>> From: dev-bounces at ensembl.org [mailto:dev-bounces at ensembl.org] On
>> Behalf Of Mekala, Swapnika (Ext)
>> Sent: Friday, March 20, 2015 4:26 PM
>> To: Ensembl developers list
>> Cc: Madhusoodanan, Nandana (Ext)
>> Subject: Re: [ensembl-dev] ENSEMBL | No required permission to
>> download ftp.ensembl.org/release-79/mysql/*/CHECKSUMS.gz file
>>
>>
>>
>> Hi Amonida,
>>
>>
>>
>> Thank you!
>>
>>
>>
>> Best Regards,
>>
>> Swapnika
>>
>>
>>
>> -----Original Message-----
>>
>> From: dev-bounces at ensembl.org<mailto:dev-bounces at ensembl.org>
>> [mailto:dev-bounces at ensembl.org] On Behalf Of Amonida Zadissa
>>
>> Sent: Friday, March 20, 2015 4:19 PM
>>
>> To: Ensembl developers list
>>
>> Cc: Madhusoodanan, Nandana (Ext)
>>
>> Subject: Re: [ensembl-dev] ENSEMBL | No required permission to
>> download
>> ftp.ensembl.org/release-79/mysql/*/CHECKSUMS.gz<ftp://ftp.ensembl.org/release-79/mysql/*/CHECKSUMS.gz>
>> file
>>
>>
>>
>> Hi there,
>>
>>
>>
>> This has now been fixed on the FTP site, sorry for the inconvenience.
>>
>>
>>
>> Best regards,
>>
>> Amonida
>>
>>
>>
>> On 20/03/2015 09:56, Mekala, Swapnika (Ext) wrote:
>>
>>> Hi,
>>
>>>
>>
>>> We are from Ensembl support team. We are trying to download the
>>> latest release of Ensembl application; i.e. release-79 to our
>>> environment.
>>
>>> The compressed sql and txt files are getting downloaded properly, but
>>> not CHECKSUMS.gz file. The only uncommon thing we observed in the
>>> same organism folder among other releases is "permissions".
>>
>>> Example, at
>>> ftp.ensembl.org:/pub/release-79/mysql/xiphophorus_maculatus_rnaseq_79_1/<ftp://ftp.ensembl.org:/pub/release-79/mysql/xiphophorus_maculatus_rnaseq_79_1/<ftp://ftp.ensembl.org:/pub/release-79/mysql/xiphophorus_maculatus_rnaseq_79_1/<ftp:/ftp.ensembl.org:/pub/release-79/mysql/xiphophorus_maculatus_rnaseq_79_1/>>,
>>> CHECKSUMZ.gz file has only r & x permissions "-r-xr-x---". Whereas in
>>> release-78, CHEKCSUMS.gz file has w permission "-rwxrwxr-x" also.
>>
>>> Could you please let us know how can we get the CHECKSUMS.gz file to
>>> our environment?
>>
>>>
>>
>>> Thanks & Regards,
>>
>>> Swapnika Mekala
>>
>>>
>>
>>>
>>
>>>
>>
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>>
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>>
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