[ensembl-dev] Ensembl Bacteria REST API

[Martina Summer-Kutmon]

Hi Dan,

Thanks for your fast reply. I will try this and let you know in case we run
into problems.

Thanks,
Martina

On Mon, Jun 15, 2015 at 4:37 PM, Dan Staines <dstaines at ebi.ac.uk> wrote:

> Hi,
>
> Your best bet is to use this endpoint which returns a JSON document
> containing gene models and their annotation for an entire genome:
> http://rest.ensemblgenomes.org/documentation/info/lookup_genome
> You'd need to add the arguments level=translation and xrefs=1 to get
> translations and their cross-references, which include GO terms.
>
> Note that we're in the midst of making our new release public, so you
> might experience very brief interruptions to the service.
>
> Hope this helps,
>
> Dan.
>
> --
> Dan Staines, PhD               Ensembl Genomes Technical Coordinator
> EMBL-EBI                       Tel: +44-(0)1223-492507
> Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
> Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/
>
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-- 



*-----------------------------------------------Martina Summer-Kutmon,
PhDemail: mkutmon at gmail.com <mkutmon at gmail.com>skype: mkutmon*
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