[ensembl-dev] Ensembl VM version 80

mag mr6 at ebi.ac.uk
Fri Jun 12 14:50:53 BST 2015


Hi G,

The VM has been updated and is now available for download from the ftp site.
Apologies about the inconvenience caused.


Regards,
Magali

On 11/06/2015 13:50, mag wrote:
> Hi G,
>
> It would seem the ApiVersion.pm file has gone missing, apologies for that.
>
> We will fix this and provide an updated version of the VM as soon as 
> possible.
>
> In the mean time, you can fix on your local copy with the following steps:
> - cd ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/
> - git checkout ApiVersion.pm
> - cd -
>
> The verify-installation script should then work fine.
>
>
> Regards,
> Magali
>
> On 11/06/2015 12:59, Genomeo Dev wrote:
>> Dear all,
>>
>> Any help with this error?
>>
>> I have downloaded Ensembl VM version 80. When I run 
>> verify-installation script, I get the following error:
>>
>> ensembl at ensembl:~$ ./verify-installation
>> ERROR: Error detected when connecting to Ensembl!
>> ================================================================================
>> If the problem persists please send the following error message to 
>> helpdesk at ensembl.org <mailto:helpdesk at ensembl.org>
>> Bio/EnsEMBL/ApiVersion.pm did not return a true value at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/Utils/Exception.pm 
>> line 103.
>> BEGIN failed--compilation aborted at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/Utils/Exception.pm 
>> line 103.
>> Compilation failed in require at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/Root.pm 
>> line 72.
>> BEGIN failed--compilation aborted at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/Root.pm 
>> line 72.
>> Compilation failed in require at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm 
>> line 73.
>> BEGIN failed--compilation aborted at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm 
>> line 73.
>> Compilation failed in require at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm 
>> line 68.
>> BEGIN failed--compilation aborted at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm 
>> line 68.
>> Compilation failed in require at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/Registry.pm 
>> line 136.
>> BEGIN failed--compilation aborted at 
>> /home/ensembl/ensembl-api-folder/ensembl/modules/Bio/EnsEMBL/Registry.pm 
>> line 136.
>> Compilation failed in require at ./verify-installation line 117.
>> ================================================================================
>>
>>
>> Thanks,
>>
>> -- 
>> G.
>>
>>
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>
>
>
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