[ensembl-dev] List of Ensembl species codes

[Greg Slodkowicz]

Great, thanks a lot! /Greg

On Wed Jan 14 2015 at 4:35:40 PM mag <mr6 at ebi.ac.uk> wrote:

>  Hi Greg,
>
> The list of all three-letter species code can be found here:
> http://www.ensembl.org/info/genome/stable_ids/index.html
>
> This information is also stored in the database for each species, for the
> meta_key species.stable_id_prefix
>
>
> Hope that helps,
> Magali
>
>
> On 14/01/2015 15:54, Greg Slodkowicz wrote:
>
> Hi all,
> I was wondering what's the best way to get a comprehensive list of the
> three-letter species codes, as they appear in various identifiers, such as
> 'ENSMUSG...' etc., ideally also with a mapping to numerical taxids?
>
> I found the list at http://www.ensembl.org/info/about/species.html and I
> can see that there is an option to export the table to CSV but the three
> letter codes are not there.
>
>
> Best,
> Greg
>
>
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