[ensembl-dev] Missing Affymetrix Probset Annotation

[Nathan Johnson]

Actually Jens, I’d be interested to know where your info for these arrays comes from as I can’t find them on the affy technical reference page:

http://www.affymetrix.com/support/technical/byproduct.affx?cat=arrays&Mouse#Mouse


Thanks

Nath

On 18 Sep 2014, at 14:55, Jens Hooge <jens.hooge at bayer.com> wrote:

> Dear EnsemblDev team,
> Hello everyone,
>  
> I’m trying to generate probeset annotations for the following Affymetrix chips using the biomart interface:
>  
> affy_hg_u133_plus_2   Affy HG U133-PLUS-2 probeset
> affy_hugene_1_0_st_v1 Affy HuGene 1_0 st v1 probeset
> affy_hugene_2_0_st_v1 Affy HuGene 2_0 st v1 probeset
> affy_mogene_2_1   Affy MoGene probeset
> affy_ragene_2_1    Affy RaGene probeset
>  
> However affy_mogene_2_1 as well as affy_ragene_2_1 seem to be missing. Are there any plans of including it in biomart and if yes when?
>  
> Mit freundlichen Grüßen / Kind Regards / Atenciosamente
>  
> Jens Hooge
>  
> ________________________________
> Jens Hooge
> Computer Scientist Bioinformatics
> Bayer HealthCare Pharmaceuticals - Bayer Pharma AG
> Target Discovery Technologies
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