[ensembl-dev] Exons numbers in VEP

[Eva Goncalves Serra]

Hi Will,

Sure, here it goes some examples:

exons   chr     position        ref     alt
41827   11      117869670       A       G
41827   11      117869878       C       T
12086   16      81819644        A       G


Cheers,
Eva

From: Will McLaren <wm2 at ebi.ac.uk<mailto:wm2 at ebi.ac.uk>>
Reply-To: Ensembl developers list <dev at ensembl.org<mailto:dev at ensembl.org>>
Date: Tuesday, 28 October 2014 10:33
To: Ensembl developers list <dev at ensembl.org<mailto:dev at ensembl.org>>
Subject: Re: [ensembl-dev] Exons numbers in VEP

Hi Eva,

This is probably a bug - can you provide an example variant that gives this result?

Thanks

Will McLaren
Ensembl Variation

On 28 October 2014 10:17, Eva Goncalves Serra <egs at sanger.ac.uk<mailto:egs at sanger.ac.uk>> wrote:
Hi,

After running VEP I realised that some variations do have numbers like ‘46569’ in the Exons number field, rather than for example ’18/20’. Does anyone know why this is?

Thanks very much,

Eva

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