[ensembl-dev] mysqldump for Macaca Fascicularis pre-data?
Jan Vogel
jan.vogel at gmail.com
Mon Oct 6 19:03:18 BST 2014
Hello Ensembl,
I've seen that the crab-eating macaque assembly is up in pre.ensembl.org, based on MacFas5.0:
http://pre.ensembl.org/Macaca_fascicularis/Info/Index/
This is great, as I'm really interested in this organism and I like to work it.
I'm looking for the mysql dump for Macaca Fascicularis so I can re-create the core database in m own environment - however, I did not find anything on the usual FTP server:
ftp://ftp.ensembl.org/pub/pre/gtf/macaca_fascicularis/
I also couldn't find the pre-db on the public mysql server….
Any chance ensembl can provide this data ? Or does it exist and i just didn't find it ?
I'm aware that this is an ensembl pre-build, that not all standard data is available and this is all just "early-access".
On a different note, it would also be great to know what the general plans with this species are - Is Ensembl planning on a full build or a projection build ? And is there a rough date when such a build will be released ?
Thanks,
Jan Vogel
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