[ensembl-dev] VEP plugin errors on Ensembl 76+

[Guillermo Marco Puche]

Dear developers,

I'm experiencing some VEP plugin errors on Ensembl 76+.

I've uploaded both plugins failing to this public repository: 
https://github.com/guillermomarco/vep_plugins

I've been looking for API changes in 
http://www.ensembl.org/info/docs/Doxygen/variation-api/classBio_1_1EnsEMBL_1_1Variation_1_1Utils_1_1BaseVepPlugin.html#a2d966d465a2bbc2a067417cc4978e304 
but I can't really find why I'm getting the following errors:

Plugin 'Interpro_fixed' went wrong: Can't call method "translation" on an undefined value at Interpro_fixed.pm line 107

Plugin 'Gene_description' went wrong: Can't call method "description" on an undefined value at Gene_description.pm line 78.


It's like hashes are empty:

$gene = $config->{ga}->fetch_by_transcript_stable_id($transcript_id);

	$gene_desc = $gene->description;


my $slice_adaptor = $config->{reg}->get_adaptor(($config->{species}), 
'core', 'Transcript');

	my $tr = $slice_adaptor->fetch_by_stable_id($Transcript);

	my $translation = $tr->translation;


I suspect of $config->{ga} and $config->{reg} are the cause of this 
problem, because I still see fetch_by_transcript_stable_idand 
fetch_by_stable_idmethods on Ensembl API.

Thanks !


Best regards,
Guillermo.
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