[ensembl-dev] Gene ID <-> Gene Ontology mapping with REST or BioMart API

Joel Fillon, Mr joel.fillon at mcgill.ca
Wed Nov 19 16:42:20 GMT 2014

Hi Magali and Dan,

OK, I got it. Thanks for the clarifications.


De : dev-bounces at ensembl.org [dev-bounces at ensembl.org] de la part de Dan Staines [dstaines at ebi.ac.uk]
Envoyé : mercredi 19 novembre 2014 05:02
À : dev at ensembl.org
Objet : Re: [ensembl-dev] Gene ID <-> Gene Ontology mapping with REST or BioMart API

On 11/19/2014 08:55 AM, mag wrote:
> By definition, our stable ids are stable between releases, so the
> annotation for ENSG00000157764 in release 76 should match closely the
> one available in the latest release (77)

Just to clarify - since Ensembl Genomes don't do genebuilds in the same
way that Ensembl do, but obtain gene models from third parties, we don't
assign or maintain stable IDs ourselves - the IDs we use come from the
source of the gene models.


Dan Staines, PhD               Ensembl Genomes Technical Coordinator
EMBL-EBI                       Tel: +44-(0)1223-492507
Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/

Dev mailing list    Dev at ensembl.org
Posting guidelines and subscribe/unsubscribe info: http://lists.ensembl.org/mailman/listinfo/dev
Ensembl Blog: http://www.ensembl.info/

More information about the Dev mailing list