[ensembl-dev] VEP custom annotation using BED

[Genomeo Dev]

Hi,

When adding cusom annotations in VEP using a bed file as described here:

http://www.ensembl.org/info/docs/tools/vep/script/vep_custom.html

does the annotation type 'overlap' cause the reporting of all overlapping
regions in the BED file for a given input variant? How is the overlap
assessed for imbalanced variants?

Thanks,

-- 
G.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20140522/298d6866/attachment.html>