[ensembl-dev] VEP - show variant when linking by location

Steve Trevanion steve at ebi.ac.uk
Thu May 1 11:40:53 BST 2014


Hi Keiran,

We are aware that the new VEP doesn't do this, and are hoping to be able 
to fix it for Ensembl 76.

Regards,

Steve



On 01/05/14 11:26, Keiran Raine wrote:
> Hi,
>
> It would be really nice if the Ensembl viewer actually indicated where 
> your variant is on the display in some way when you link through from 
> VEP.  I can see that the ticket ID for a VEP request is passed through 
> to the viewer when you click the 'Location' link in the results.
>
> Altering the track config to include 'Your Data' has no effect.  Is 
> this a bug or do the systems not link to this degree?
>
> Kind regards,
>
> Keiran Raine
> Principal Bioinformatician
> Cancer Genome Project
> Wellcome Trust Sanger Institute
>
> kr2 at sanger.ac.uk <mailto:kr2 at sanger.ac.uk>
> Tel:+44 (0)1223 834244 Ext: 7703
> Office: H104
>
>
>
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