[ensembl-dev] Warning when registry is loaded

[Sébastien Moretti]

Hi

with the API from Ensembl 75, every time I load the registry I got this 
warning I did not get before:

Use of uninitialized value $driver in string eq at
 
/usr/local/ensembl/ensembl/modules//Bio/EnsEMBL/DBSQL/DBConnection.pm 
line 162 (#1)



It looks to work as before with it but it's a bit annoying in log files 
and maybe highlight a potential problem.


I set the connection to our local, or the official, Ensembl db this way:
#!/usr/bin/env perl

use strict;
use warnings;
use diagnostics;

use Bio::EnsEMBL::Registry;

my $registry = 'Bio::EnsEMBL::Registry';

$registry->load_registry_from_db(
     -host    => 'ensembldb.ensembl.org',
     -user    => 'anonymous',
     -species => 'homo sapiens',
     -verbose => 1,
);

exit 0;


Noticed with perl 5.14.2 and 5.16.2

Thanks

-- 
Sébastien Moretti
Department of Ecology and Evolution,
Biophore, University of Lausanne,
CH-1015 Lausanne, Switzerland
Tel.: +41 (21) 692 4221/4079
http://selectome.unil.ch/ http://bgee.unil.ch/