[ensembl-dev] Ensembl 75 MySQL problem

[Andy Yates]

Hi Guillermo,

Each release's set of files are loaded into a MySQL mirror database here at the EBI to detect these kinds of file regressions. I cannot report any problems with loaded any files from release 75. Could you elaborate on your error?

All the best,

Andy

------------
Andrew Yates - Ensembl Support Coordinator
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On 18 Jul 2014, at 12:26, Guillermo Marco Puche <guillermo.marco at sistemasgenomicos.com> wrote:

> Hello,
> 
> Could anyone confirm me that files I mentioned are working properly on local MySQL server?
> I've been messing around with MySQL server config settings, have no problem with releases from 61 to 74 with installation. But 75 isn't working.
> 
> I'm very skeptical about server fault. I some mysql files inside homo_sapiens_variation could be different than previous versions. I would like to know if the mysql instructions to install DB have changed from 74 to 75. If any of Ensembl admins could confirm me this it would be great.
> 
> Thank you.
> 
> Best regards,
> Guillermo.
> 
> On 07/17/2014 03:06 PM, Guillermo Marco Puche wrote:
>> Dear developers,
>> 
>> Since two weeks I'm trying to install the ensembl 75 release on local MySQL server. (I've done this before since release 61 until release 74).
>> 
>> I always install the following schemes:
>> 
>> 	• ensembl_compara
>> 	• ensembl_ontology
>> 	• homo_sapiens_core
>> 	• homo_sapiens_funcgen
>> 	• homo_sapiens_otherfeatures
>> 	• homo_sapiens_variation
>> 
>> I'm experiencing a problem I've never encountered in the past. I'm getting installation problem on homo_sapiens_variation.
>> I've downloaded the sql *.tar.gz 4 times in the last two weeks. And I'm experiencing the mysql error install. With version 74 and older I've no problem.
>> 
>> Could you guys check if that file is corrupted on public mysql ftp server? Is the only logical explanation that comes to my mind.
>> 
>> Thank you.
>> 
>> Best regards,
>> Guillermo.
>> 
>> 
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