[ensembl-dev] VEP script installation in CloudBioLinux

[Michael Heuer]

Hello Andy,

So far I have only hacked up the one for VEP.  :)

   michael


On Fri, Sep 13, 2013 at 4:23 AM, Andy Yates <ayates at ebi.ac.uk> wrote:
> Hi,
>
> Just to quickly ask do you have any experience of building a custom installation script for CloudBioLinux?
>
> Andy
>
> ------------
> Andrew Yates - Ensembl Core Software Project Leader
> European Bioinformatics Institute (EMBL-EBI)
> European Molecular Biology Laboratory
> Wellcome Trust Genome Campus
> Hinxton
> Cambridge CB10 1SD
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>
> On 11 Sep 2013, at 16:48, Michael Heuer <heuermh at gmail.com> wrote:
>
>> Hello,
>>
>> I would like to have the variation effect predictor (VEP) script
>> available in the CloudBioLinux distribution
>>
>> http://cloudbiolinux.org
>>
>> VEP is currently available as a custom build but we do some mucking
>> about with the installation script with sed to deal with the
>> interactivity
>>
>> https://github.com/chapmanb/cloudbiolinux/pull/116
>>
>> Would it be possible for someone from the dev team to weigh in on this issue?
>>
>> Thank you,
>>
>>   michael
>>
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>
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