[ensembl-dev] Fwd: VEP script installation in CloudBioLinux

Fiona Cunningham fiona at ebi.ac.uk
Fri Sep 13 10:04:56 BST 2013


Dear Michael,

Many thanks for the suggestion. We will take a look.

Best wishes,

Fiona

---------------------------------------------------------------------------------------------------------------
Fiona Cunningham, Ensembl Coordinator, Ensembl Variation Project Leader.
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton,  CB10 1SD, UK
www.ensembl.org || www.lrg-sequence.org || t: +44 1223 494612


On 11 September 2013 16:48, Michael Heuer <heuermh at gmail.com> wrote:
> Hello,
>
> I would like to have the variation effect predictor (VEP) script
> available in the CloudBioLinux distribution
>
> http://cloudbiolinux.org
>
> VEP is currently available as a custom build but we do some mucking
> about with the installation script with sed to deal with the
> interactivity
>
> https://github.com/chapmanb/cloudbiolinux/pull/116
>
> Would it be possible for someone from the dev team to weigh in on this issue?
>
> Thank you,
>
>    michael
>
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