[ensembl-dev] Plants public mysql database
Rishi Nag
rn6 at sanger.ac.uk
Fri May 24 12:16:23 BST 2013
Hi Edwin
On the page it says
"Note: You can also access the Ensembl Plants data through the MySQL
server of our collaborator, Gramene." ;-)
The Gramene database access information is listed in the table on that
page.
Regards
Rishi
On Fri, 24 May 2013 11:55:28 +0100, Edwin van Leeuwen <edder at tkwsping.nl>
wrote:
> Hi all,
>
> I would like to access the public database to get data on plant genes. I
> found the following page with database urls:
> http://plants.ensembl.org/info/data/mysql.html
> which tells me to access:
> ensembldb.ensembl.org
> but when I try to see all the database names with:
> mysqlshow -u anonymous -h ensembldb.ensembl.org -P 5306
> I don't seem to see a database for arabidopsis (or the other plants).
>
> Does anyone know what the correct url is? (is this data actually
> available through mysql?)
>
> Kind regards,
> Edwin
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