[ensembl-dev] VEP check existing.

[Guillermo Marco Puche]

What's the field name on output?

On 05/22/2013 06:50 PM, Duarte Molha wrote:
>
> In that case the field remains empty or with a dash of the fields is 
> part of the main annotation fields (the default behavior)
>
> On 22 May 2013 16:45, "Guillermo Marco Puche" 
> <guillermo.marco at sistemasgenomicos.com 
> <mailto:guillermo.marco at sistemasgenomicos.com>> wrote:
>
>     In case it doesn't exist what's the behavior then?
>
>     On 05/22/2013 05:20 PM, Duarte Molha wrote:
>>     It does exactly that ... it checks Ensembl to find out if the
>>     variation you are annotation has already been added to the
>>     database (ie has a RS id identifier)
>>
>>     =========================
>>          Duarte Miguel Paulo Molha
>>     http://about.me/duarte
>>     =========================
>>
>>
>>     On Wed, May 22, 2013 at 4:09 PM, Guillermo Marco Puche
>>     <guillermo.marco at sistemasgenomicos.com
>>     <mailto:guillermo.marco at sistemasgenomicos.com>> wrote:
>>
>>         Hello,
>>
>>         I'm a bit in doubt with the follow VEP option, --check_existing.
>>
>>         I'm not really sure what it does. I've read the description
>>         like a hundred times and i'm still confused. If someone could
>>         explain this in detail it would be awesome.
>>
>>
>>         Thank you.
>>
>>         Best regards,
>>         Guillermo.
>>
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>>
>
>
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