[ensembl-dev] BioPerl version

[Roy Storey]

We have the blastview script running on v69 with bioperl-live
(bioperl-release-1-2-3) and bioperl-release-1-6-901 for the latest
version of Bio::DB::Sam elsewhere in the ensweb environment. I just
moved the bioperl-release-1-6-901 version Bio::Root::Storable sideways
to get blastview functional again (blastview relies on the 1.2.3
functionality of Bio::Root::Storable).

Roy

On 11/05/2013, at 2:44, "Youens-Clark, Ken" <kclark at cshl.edu> wrote:

> I have the v70 Ensembl BLAST code installed on a machine.  BioPerl 1.2.3 is linked in as the "bioperl-live" directory, but 1.6.9 is also installed into the standard Perl library.  I believe this is causing conflicts.  Which is the recommended version?
>
> --
> Ken Youens-Clark
> kclark at cshl.edu
> Ware Lab/CSHL/USDA-ARS
>
>
>
>
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