[ensembl-dev] itemRgb="On" and useScore=3 down work together

[Anne Parker]

Hi Andrew

It's not currently possible to draw a histogram in different colours - this would require a change in the glyphset. I can look at putting it into e70 but that won't be out until January.

Cheers

Anne


On 8 Nov 2012, at 13:10, Andrew Tikhonov wrote:

> Dear Ens-Dev,
> 
> 	BED itemRgb="On" works OK, useScore=3 works OK. But useScore=3 and itemRgb="On" don't work OK together. Can you enable itemRgb in useScore=3 mode ? How long will it take ?
> 
> browser position chr7:127471196-127495720
> track name="Histogram" description="Histogram demonstration" visibility=2 useScore=3 height=30 
> itemRgb="On"
> 
> 7  127471196  127472363  Pos1  700  +  127471196  127472363  255,0,0
> 7  127472363  127473530  Pos2  800  +  127472363  127473530  255,0,0
> 7  127473530  127474697  Pos3  900  +  127473530  127474697  255,0,0
> 7  127474697  127475864  Pos4  100  +  127474697  127475864  255,0,0
> 7  127475864  127477031  Neg1  500  -  127475864  127477031  0,0,255
> 7  127477031  127478198  Neg2  400  -  127477031  127478198  0,0,255
> 7  127478198  127479365  Neg3  300  -  127478198  127479365  0,0,255
> 7  127479365  127480532  Pos5  1000  +  127479365  127480532  255,0,0
> 7  127480532  127481699  Neg4  0  -  127480532  127481699  0,0,255
> 
> 
> track name="ItemRGBDemo" description="Item RGB demonstration" itemRgb="On" 
> chr7  127471196  127472363  Pos1  0  +  127471196  127472363  255,0,0
> chr7  127472363  127473530  Pos2  0  +  127472363  127473530  255,0,0
> chr7  127473530  127474697  Pos3  0  +  127473530  127474697  255,0,0
> chr7  127474697  127475864  Pos4  0  +  127474697  127475864  255,0,0
> chr7  127475864  127477031  Neg1  0  -  127475864  127477031  0,0,255
> chr7  127477031  127478198  Neg2  0  -  127477031  127478198  0,0,255
> chr7  127478198  127479365  Neg3  0  -  127478198  127479365  0,0,255
> chr7  127479365  127480532  Pos5  0  +  127479365  127480532  255,0,0
> chr7  127480532  127481699  Neg4  0  -  127480532  127481699  0,0,255
> 
> 
> 	Thanks in advance.
> 
> 
> Regards,
> Andrew
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Anne Parker
Ensembl Web Production Manager
http://www.ensembl.org