[ensembl-dev] Condel Plugin
sunita at pathology.wustl.edu
Wed Jun 20 15:46:41 BST 2012
Thanks Michael for the response.
Please bear with me as I am little confused about the config directory
Condel.pm is under
I see a Config.pm file under that besides condel.pm
There is no config directory as such.
From: Michael Yourshaw [mailto:myourshaw at ucla.edu]
Sent: Friday, June 15, 2012 5:38 PM
To: Koul, Sunita
Cc: Ensembl developers list
Subject: Re: [ensembl-dev] Condel Plugin
You need to specify some parameters for the Condel plugin
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On Jun 15, 2012, at 15:04, Koul, Sunita wrote:
I am trying to run Condel using the variant effect predictor using the following command
perl variant_effect_predictor.pl -i input.vcf --plugin Condel
I get the error
Can't locate loadable object for module Win32 in @INC (@INC contains: E:\Perl\variant_effect_predictor\Bio\bioperl-1.2.3 E:\Perl\variant_effect_predictor\Bio\ensembl\modules E:\Perl\variant_effect_predictor\Bio\ensembl-compara\modules
E:\Perl\variant_effect_predictor\Bio\ensembl-variation\modules E:\Perl\variant_effect_predictor\Bio\ensembl-functgenomics\modules E:\Perl\variant_effect_predictor\Bio\ensembl-variation\modules\Bio\EnsEMBL\Variation\Utils ---
Any idea why this is happening(I am using Windows to run this tool)
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