[ensembl-dev] Retrieving chromosomal band for a gene with the core API

[usman Ali]

thank u very much sir


On Tue, Jun 12, 2012 at 3:59 PM, Oliver, Gavin
<gavin.oliver at almacgroup.com>wrote:

> Hi, ****
>
>
> I am wondering what the quickest way to get from an Ensembl gene ID to a
> corresponding chromosomal band is with the core API?****
>
> ** **
>
> I can get all the karyotype bands for the slice as follows:****
>
> ** **
>
> my $gene = $gene_adaptor->fetch_by_stable_id($geneid);****
>
> my @{$slicekaryo} = $gene->slice->get_all_KaryotypeBands;****
>
> ** **
>
> ** **
>
> But I want to know the most succinct way to retrieve only the band the
> gene corresponds to.****
>
> ** **
>
> Best, ****
>
> ** **
>
> Gavin****
>
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