[ensembl-dev] VEP 2.6 update?

Duarte Molha Duarte.Molha at ogt.co.uk
Tue Jul 17 14:15:33 BST 2012


Thanks Will

Can't wait to get my hands on the new build :-)

BTW... are you guys considering adding sift and polyphen scores to the mouse genome or that is not on your the near-term plans?

Cheers

Duarte


-----Original Message-----
From: dev-bounces at ensembl.org [mailto:dev-bounces at ensembl.org] On Behalf Of Will McLaren
Sent: 17 July 2012 13:57
To: Ensembl developers list
Subject: Re: [ensembl-dev] VEP 2.6 update?

Hi Duarte,

Thanks for spotting this - the link from our tools page is going to the HEAD area of our CVS tree instead of the 68 branch.

The latest stable version will always be available from http://www.ensembl.org/info/docs/variation/vep/vep_script.html#download

Cheers

Will

On 17 July 2012 13:51, Duarte Molha <Duarte.Molha at ogt.co.uk> wrote:
> Ok Will.
>
> It is just that when you download it from the website you are given the 2.6 version but the documentation does not reflect that. Can I run this 2.6 version on the current ensembl 67?
>
> Best regards
>
> Duarte
>
>
> -----Original Message-----
> From: dev-bounces at ensembl.org [mailto:dev-bounces at ensembl.org] On 
> Behalf Of Will McLaren
> Sent: 17 July 2012 13:46
> To: Ensembl developers list
> Subject: Re: [ensembl-dev] VEP 2.6 update?
>
> Hi Duarte,
>
> The next version of VEP will be released alongside Ensembl v68, which is due in the next few weeks.
>
> If you subscribe to announce at ensembl.org you will get emails announcing release dates etc.
>
> Cheers
>
> Will
>
> On 17 July 2012 13:41, Duarte Molha <Duarte.Molha at ogt.co.uk> wrote:
>> Dear Devs.
>>
>>
>>
>> I just downloaded the latest variant_effect_predictor but on your 
>> website the latest version documented is 2.5.
>>
>>
>>
>> When are you updating the site to reflect the latest changes and 
>> where can I get the latest cache files with 1000 genomes MAF?
>>
>>
>>
>> Best regards,
>>
>>
>>
>> Duarte Molha
>>
>>
>>
>>
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