[ensembl-dev] Sequence differences between UCSC and Ensembl HG19 for Mitochondria

Giulietta gspudich at ebi.ac.uk
Thu Feb 23 12:24:32 GMT 2012

Dear Duarte Molha,

In Ensembl, we are using the most recent update, GenBank record NC_012920.


In UCSC's 'Note on chrM' they state they have not updated to this record.


I hope this helps.


On 17/02/2012 14:47, Duarte Molha wrote:
> Dear Developers
> I am noticed that the HG19 mitochondria sequence ENSEMBL retrieves for 
> coordinates 1-1000 is different from UCSC genome browser.
> Could you tell me why is this the case?
> Best regards
> Duarte Molha
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