[ensembl-dev] Which Variation Database Is used in VEP ??

[Will McLaren]

Hi Rashid,

If you are using API version 66, then the VEP will connect to database
version 66.

You can see this if you use --verbose on the command line; the database
version used is also printed in the header of your output file.

Regards

Will McLaren
Ensembl Variation


On 6 December 2012 10:41, Rashid Mamunur <rm8 at sanger.ac.uk> wrote:

> Hi Guys,
>
> Apology for such a naive question .
>
> I use Variant Effect Predictor [VEP] script to annotate some variants with
> possible consequences. I use the API version 66.
> I was wondering, does the VEP uses the API version as default or just
> takes the latest data base
> version from Ensembl database ??
>
> thanks,
> Mamun
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