[ensembl-dev] Variant Effect predictor error message

Mark Aquino aquinom85 at me.com
Tue Oct 25 15:38:26 BST 2011


Hi,

I'm getting this error:

homo_sapiens is not a valid species name for this instance
homo_sapiens is not a valid species name for this instance
Use of uninitialized value $species in hash element at /users/maquino/src/ensembl/modules/Bio/EnsEMBL/Registry.pm line 958.
Use of uninitialized value $species in hash element at /users/maquino/src/ensembl/modules/Bio/EnsEMBL/Registry.pm line 969.
ERROR: Could not connect to core database

When I try to run the variant effect predictor.

Is the core database still down and that's what's causing this error or is there something else going wrong here?

-Mark




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