[ensembl-dev] Warning message on VEP script

Duarte Molha Duarte.Molha at ogt.co.uk
Tue Nov 22 14:06:07 GMT 2011


Dear Devs.

I am sorry to be bothering you once more but I was wondering if any of you would be able to tell me what this waringin message might be referring to.

-------------------- WARNING ----------------------
MSG: Offset outside of prediction matrix for position 182 and amino acid R?
FILE: EnsEMBL/Variation/ProteinFunctionPredictionMatrix.pm LINE: 626
CALLED BY: EnsEMBL/Variation/ProteinFunctionPredictionMatrix.pm  LINE: 271
Ensembl API version = 64
---------------------------------------------------

I get this when I run some of my VCF files though the script and I am not sure what to make of it.

Best regards

Duarte Molha

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