[ensembl-dev] Display BAM data against NCBI36 human genome
Fedor Gusev
gusevfe at gmail.com
Thu Mar 17 13:39:35 GMT 2011
Hello.
I managed to install a local copy of Ensembl (release-54, the last to
have NCBI 36). And I want to add custom BAM tracks.
The problem is: release 54 seems not to support BAMs. Still
1000genomes projects can display BAMs against NCBI36.
I see two ways now:
1) get the latest release of Ensembl and upload NCBI36. But the
database schema changed too much since release 54.
2) modify release 54 to support BAM custom tracks.
While I can deal with latter, I am wondering:
a) if the first option is possible,
b) how 1000genomes people achieved BAMs and NCBI36 at the same time.
Thanks in advance.
--
Kind regards,
Fedor Gusev.
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